Circos
Introduction
Circos
is a software package for visualizing data and information.
For more information, please check its website: https://biocontainers.pro/tools/circos and its home page: http://circos.ca.
Versions
0.69.8
Commands
circos
Module
You can load the modules by:
module load biocontainers
module load circos
Example job
Warning
Using #!/bin/sh -l
as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash
instead.
To run Circos on our clusters:
#!/bin/bash
#SBATCH -A myallocation # Allocation name
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH --job-name=circos
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out
module --force purge
ml biocontainers circos
circos -conf circos.conf